American Sweetgum - Abiotic Stress Gene Expression
Summary
Name | American Sweetgum - Abiotic Stress Gene Expression |
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Resource Type | Gene Expression Profile |
Organism | |
Description | This project aims to elucidate the molecular response of hardwood tree seedlings to varying abiotic stresses. Stress experiments include ozone exposure, mechanical damage (wounding), heat, drought, and cold. A number of different adult tissue types were also profiled.
Expression profiles were determined by mapping reads to the set of assembled transcripts. Reads were mapped with Bowtie2 and counted using HTSeq. Values were normalized using RPKM (Reads Per Kilobase Million) for gene expression profiles.
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Expression Data | This analysis contains expression data for 127406 features across 44 biosamples. |
Program, Pipeline, Workflow or Method Name | HTSeq; RPKM |
Program Version | n/a |
Date Performed | Wednesday, April 20, 2016 - 21:00 |
Data Source |
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