Summary
Publication
Staton, M., Addo-Quaye, C., Cannon, N., Yu, J., Zhebentyayeva, T., Huff, M., ... & Bellis, E. (2020). A reference genome assembly and adaptive trait analysis of Castanea mollissima ‘Vanuxem,’a source of resistance to chestnut blight in restoration breeding. Tree Genetics & Genomes, 16(4), 1-23.
Name
Castanea mollissima v3.4 and 4.3 - Reference Genome
Resource Type
Genome Assembly
Organism
Details
Program, Pipeline, Workflow or Method Name
N/A
Program Version
N/A
Assembly Size
725,182,650
Number of Scaffolds
14,110
Number of Annotated Genes
30,832
Date Performed
Wednesday, April 17, 2019 - 16:36
Data Source
Source Name
: DNA from cultivar 'Vanuxem'
Cross Reference
Description and Download

Downloads

Genomic scaffolds v3.4
All Gene Models CDS v3.4
All Gene Models Protein v3.4
All Gene Models GFF v3.4 HQ
All Gene Models GFF v3.4 LQ
Genomic scaffolds v4.3
All Gene Models CDS v4.3
All Gene Models Protein v4.3
All Gene Models GFF v4.3
Contig Positions v4.3

Source

Staton, M., Addo-Quaye, C., Cannon, N., Yu, J., Zhebentyayeva, T., Huff, M., ... & Bellis, E. (2020). A reference genome assembly and adaptive trait analysis of Castanea mollissima 'Vanuxem,' a source of resistance to chestnut blight in restoration breeding Tree Genetics & Genomes, 16(4), 1-23. Resources: JBrowse - v3.2 contigs and annotation
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