Kandelia obovata - Reference Genome

Fresh K. obovata tissues were collected from the Quanzhou Estuary Wetland Provincial Nature Reserve, Fujian Province, China. Genomic DNA was isolated from fresh leaves for de novo sequencing and assembly. Paired-end libraries (500 bp) were constructed according to the Illumina protocol. Genome size and heterozygosity were measured using KmerFreq and GCE based on a 17-K-mer distribution. In addition, a 20 kb insert library was constructed according to the PacBio RSII protocol and subsequently sequenced on the PacBio platform. The transcriptomes of different tissues of K. obovata were sequenced on the Illumina platform.

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	Genomic scaffolds Genomic scaffolds
	All Gene Models CDS All Gene Models CDS
	All Gene Models Protein All Gene Models Protein
	All Gene Models GFF All Gene Models GFF

Source

Hu, M. J., Sun, W. H., Tsai, W. C., Xiang, S., Lai, X. K., Chen, D. Q., ... & Zhang, D. Y. (2020). Chromosome-scale assembly of the Kandelia obovata genome Horticulture Research, 7(1), 1-12.