Fagus grandifolia

Summary

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Summary

Resource Type	Organism
Abbreviation	F. grandifolia
Genus	Fagus
Species	grandifolia
Common Name	American Beech
Organism Image
Description	Order: Fagales Family: Fagaceae The North American Beech Tree is one native to the eastern coast of the United States. This deciduous tree has flowers of both sexes on the same tree. The tree is susceptible to Beech Bark Disease, which is caused by insects that create wounds in the bark which in turn allows Fungi to infect the tree. The bark of the tree is strong and durable making this tree useful for furniture and woodenware.
Cross Reference	NCBITaxon:60423

Feature Search

You can search this organism’s features in the database by entering search terms in the box. You can search by feature name or annotation.

Transcriptome

Name	Program	Date Constructed
de novo American Beech (Fagus grandifolia) - ABall_v2	SeqManPro	Aug 15th, 2008

Analysis Details

Provides detailed information on the programs used to assemble and annotate the data.

Name	Program	Date Constructed
Interpro Analysis of American Beech (Fagus grandifolia)	InterProScan	Mar 28th, 2016
American Beech (blastx against TrEMBL)	blastx	Mar 28th, 2016
American Beech (blastx against sprot)	blastx	Mar 28th, 2016
de novo American Beech (Fagus grandifolia) - ABall_v2	SeqManPro	Aug 15th, 2008
Simple Sequence Repeats (SSR) prediction ( F. grandifolia)	SSR prediction pipeline	Jul 5th, 2018

Biological Samples

Name	Tissue	Treatment	Description
American beech whole plant 1	Mix (Whole tree)	None	ESTS derived from tissues from healthy, mature tree #1504 at USFS, Delaware, OH. A mixture of tissues representing the whole plant was combined.
American beech whole plant 2	Mix (Whole tree)	None	ESTS derived from tissues from mature tree #1506 at USFS, Delaware, OH. Tree had Beech Park Disease. A mixture of tissues representing the whole plant was combined.

Predicted SSRS (genomic)

microsatellite:

There are 28 SSR markers associated with 28 features in this organism.

The complete list of SSR markers, their properties, and primers to amplify then can be found on the corresponding analysis page.

Analysis Name
Simple Sequence Repeats (SSR) prediction ( F. grandifolia)

You can search for markers below: the form will return the gene features they are associated with.