Pterocarya stenoptera

Summary

Reference Genome

JBrowse

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Transcriptome

Analysis Details

Biological Samples

Mapping Population

Confirmed Polymorphic SSRs

Predicted SSRS (genomic)

Polymorphic SSRS

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Ontology Browser

Summary

Resource Type	Organism
Abbreviation	P. stenoptera
Genus	Pterocarya
Species	stenoptera
Common Name	Chinese wingnut
Organism Image
Description	P. stenoptera is a tall shade tree known as the Chinese Wingnut. The tree has accumulated resistances to several pests and diseases that walnut trees are susceptible to. The tree is used for rootstock, however hybrids between P stenoptera and J regia are non-viable.

Reference Genome

Name	Program	Date Constructed
Draft reference genomes for six Juglans species and Pterocarya stenoptera	Trinity, MUMmer, Samtools	Jun 14th, 2018

JBrowse

Stephens et al. produced ‘draft’ genomes for six Juglans species and the related Pterocarya stenoptera. The draft genome contigs were aligned to the Juglans regia genome scaffolds using nucmer (see paper for details). These alignments are available as tracks on the J. regia JBrowse.

Go to JBrowse

Analysis Details

Provides detailed information on the programs used to assemble and annotate the data.

Name	Program	Date Constructed
Draft reference genomes for six Juglans species and Pterocarya stenoptera	Trinity, MUMmer, Samtools	Jun 14th, 2018

Predicted SSRS (genomic)

microsatellite:

There are 0 SSR markers associated with 0 features in this organism.

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